r-yaml : R package for converting objects to and from YAML
author: viking
created: 2008-04-28 21:52:03
cran r yaml c


evaluate : A version of eval for R that returns more information about what happened
author: r-lib
created: 2008-05-18 13:40:10
evaluation parsing r r-package repl


ggplot2 : An implementation of the Grammar of Graphics in R
author: tidyverse
created: 2008-05-25 01:21:32
data-visualisation r visualisation


munsell : munsell colour system for R
author: cwickham
created: 2009-01-15 21:22:07
munsell-colour r html


lubridate : Make working with dates in R just that little bit easier
author: tidyverse
created: 2009-03-11 01:18:52
date date-time r


R4CouchDB : Collection of functions 4 R and CouchDB interaction
author: wactbprot
created: 2009-08-09 18:37:26
couchdb database r rstats


testthat : An R 📦 to make testing 😀
author: r-lib
created: 2009-09-02 12:51:44
r unit-testing


stringr : A fresh approach to string manipulation in R
author: tidyverse
created: 2009-11-08 22:20:08
r regular-expression strings


oce : R package for oceanographic processing
author: dankelley
created: 2010-03-19 21:23:42
oceanography r


devtools : Tools to make an R developer's life easier
author: r-lib
created: 2010-05-03 04:08:49
package-creation r


IgorR : R package to load Igor Pro waves (ibw) and experiment files (pxp) in R
author: jefferis
created: 2010-10-01 19:13:27
electrophysiology igor neuromatic pro r


MSnbase : Base Classes and Functions for Mass Spectrometry and Proteomics
author: lgatto
created: 2010-10-02 15:27:36
bioconductor bioinformatics mass-spectrometry proteomics proteomics-data r visualisation


datamicroarray : A collection of small-sample, high-dimensional microarray data sets to assess machine-learning algorithms and models.
author: ramhiser
created: 2010-10-06 18:59:57
cancer colon-cancer high-dimensional-data machine-learning r


sparsediscrim : Sparse and Regularized Discriminant Analysis in R
author: ramhiser
created: 2010-10-14 23:38:21
classifier high-dimensional-data machine-learning r


scales : Graphical scales
author: r-lib
created: 2010-11-08 00:44:23
ggplot2 r


SimpleITK : SimpleITK: a simplified layer build on top of the Insight Toolkit (ITK), intended to facilitate its use in rapid prototyping, education and interpreted languages.
author: SimpleITK
created: 2010-11-10 18:56:04
c-plus-plus csharp image-analysis image-processing itk java lua python r registration ruby segmentation simpleitk swig tcl c++


memoise : Easy memoisation for R
author: r-lib
created: 2010-11-11 17:37:44
memoise r


Risa : Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the package also provides functionality to save the ISA-tab dataset, or each of its individual files. Additionally, it is also possible to update assay files. Currently, metadata associated to proteomics and metabolomics-based assays (i.e. mass spectrometry) can be processed into an xcmsSet object (from the xcms R package).
author: ISA-tools
created: 2011-03-07 22:51:18
bioconductor isa isa-tab-dataset r-package r


rrdf : R package for handling RDF data.
author: egonw
created: 2011-03-22 21:08:09
r-package rdf semantic-web r


RSurvey : Geographic Information System Application
author: USGS-R
created: 2011-03-27 20:14:57
gui r spatial usgs


mapDamage : mapDamage: tracking and quantifying damage patterns in ancient DNA sequences
author: ginolhac
created: 2011-04-05 07:52:38
ancient-dna-sequences ngs python r


GenPwd : Simple password generator in HTML+JS
author: alphajuliet
created: 2011-04-20 06:42:08
generator html javascript password r


taxize : A taxonomic toolbelt for R
author: ropensci
created: 2011-05-19 15:05:33
api api-wrapper biodiversity biology darwincore data nomenclature r r-package rstats taxize taxonomy


rplos : R client for the PLoS Journals API
author: ropensci
created: 2011-06-02 01:06:42
metadata pdf plos r r-package rstats text-mining web-api xml


LotteryPrediction : :full_moon_with_face: Lottery prediction using GA+BF ANN+FL(GeneticAlogrithm+ArtificalNeuralNetwork+FuzzyLogicControl) based on SciPy/NumPy/matplotlib/R/SAS/TensorFlow/Keras
author: yangboz
created: 2011-06-15 04:22:30
keras mine-data predictive-analytics r sas scatter-plot series-analysis tensoflow tensorflow wechat-mini-program javascript


bold : Interface to the Bold Systems barcode webservice
author: ropensci
created: 2011-06-25 03:23:46
api-wrapper barcodes r r-package rstats sequences taxize


rbhl : R interface to the Biodiversity Heritage Library (BHL) API
author: ropensci
created: 2011-07-18 19:21:22
api-wrapper biodiversity-heritage-library data metadata r r-package rstats web-api


reportr : A general message and error reporting system for R
author: jonclayden
created: 2011-07-27 12:28:13
r


whisker : {{mustache}} for R
author: edwindj
created: 2011-07-28 10:01:34
mustache-templates r


RNiftyReg : An R interface to the NiftyReg medical image registration library
author: jonclayden
created: 2011-07-28 12:58:13
image-registration medical-imaging r transformations c++


node-rio : Integration with Rserve, a TCP/IP server for R framework
author: albertosantini
created: 2011-08-04 07:15:56
r rserve javascript


tractor : Magnetic resonance imaging and tractography with R
author: tractor
created: 2011-08-05 11:01:35
brain-imaging graph-algorithms parcellation r tractography c++


rnpn : R client for the National Phenology Network database API
author: ropensci
created: 2011-08-08 18:57:41
data national-phenology-network phenology r r-package rstats species web-api


rgbif : Interface to the Global Biodiversity Information Facility API
author: ropensci
created: 2011-08-26 11:28:18
api biodiversity data gbif r r-package rstats species spocc


rvertnet : Wrapper to the VertNet API
author: ropensci
created: 2011-09-09 16:30:41
api-wrapper biodiversity r r-package rstats specimen spocc vertnet


rzmq : R package for ZMQ
author: ropensci
created: 2011-09-28 02:11:59
r r-package rstats zeromq zmq c++


rdatacite : Wrapper to DataCite metadata
author: ropensci
created: 2011-10-05 18:38:29
api-wrapper datacite identifier metadata oai-pmh r r-package rstats solr


knitr : A general-purpose tool for dynamic report generation in R
author: yihui
created: 2011-10-17 20:09:04
dynamic-documents knitr literate-programming r rmarkdown sweave


activelearning : Active Learning in R
author: ramhiser
created: 2011-10-18 15:46:15
active-learning machine-learning r


CTLmapping : Correlated Trait Locus (CTL) mapping
author: DannyArends
created: 2011-10-21 11:08:45
correlation genetic gwas inference level multi network omics r


rfisheries : package for interacting with fisheries databases at openfisheries.org
author: ropensci
created: 2011-10-31 18:29:04
fisheries open-data openfisheries r r-package rstats


ritis : Integrated Taxonomic Information Service (ITIS) R client
author: ropensci
created: 2011-11-02 04:52:30
api-wrapper itis r r-package rstats taxize taxonomy


rflybase : A wrapper to FlyBase data
author: ropensci
created: 2011-11-09 21:04:03
chado chado-database flybase flybase-database r r-package rstats


httr : httr: a friendly http package for R
author: r-lib
created: 2011-11-11 15:05:00
api curl http r


rfishbase : R interface to the fishbase.org database
author: ropensci
created: 2011-11-18 01:03:37
fish fishbase r r-package rstats taxonomy


treebase : An R interface to the treeBASE API (now on CRAN)
author: ropensci
created: 2011-11-18 01:04:00
r r-package rstats tex


readbitmap : R package to identify and read bitmap images
author: jefferis
created: 2011-12-12 14:27:24
bmp jpeg png r tiff


rfna : Web page scraping for eFloras, including the Flora of North America
author: ropensci
created: 2011-12-12 16:53:32
efloras flora floras north-america r r-package rstats


rsunlight : Interface to APIs previously under Sunlight Labs
author: rOpenGov
created: 2011-12-18 16:19:19
api-client rstats sunlight-labs r


OpenMx.tmbundle : Textmate support for Structural equation modeling in OpenMx.
author: tbates
created: 2011-12-19 23:00:50
behavior-genetics cran machine-learning matrix-algebra optimization psychology r sem statistics structural-equation-modeling textmate textmate-bundle


rFerns : Migrated to NotABug
author: mbq
created: 2011-12-29 16:57:40
cran machine-learning random-ferns r


gtable : The layout packages that powers ggplot2
author: r-lib
created: 2011-12-30 16:08:43
r


randomNames : Function to generate random gender and ethnicity correct first and/or last names. Names are chosen proportionally based upon their probability of appearing in a large scale data base of real names.
author: CenterForAssessment
created: 2012-01-05 03:40:35
cran r random-name-generators random-names


SGP : Functions to calculate student growth percentiles and percentile growth projections/trajectories for students using large scale, longitudinal assessment data. Functions use quantile regression to estimate the conditional density associated with each student's achievement history. Percentile growth projections/trajectories are calculated using the coefficient matrices derived from the quantile regression analyses and specify what percentile growth is required for students to reach future achievement targets.
author: CenterForAssessment
created: 2012-01-05 03:51:40
cran percentile-growth-projections quantile-regression r sgp sgp-analyses student-growth-percentiles student-growth-projections


RMySQL : An R interface for MySQL
author: r-dbi
created: 2012-01-12 17:27:03
database mysql r c


psd : Adaptive, sine-multitaper power spectral density estimation in R
author: abarbour
created: 2012-01-12 19:35:20
multitaper power-spectral-density power-spectrum psd r spectral-density-estimates spectrum


rsnps : Wrapper to a number of SNP web APIs
author: ropensci
created: 2012-01-19 00:19:21
data r r-package rstats snps web-api html


afsp2011 : Replication material for a paper on British health policy.
author: briatte
created: 2012-01-19 03:58:44
conference-paper political-science replication-materials r


citeulike : ⛔️ [DEPRECATED] R interface to CiteULike
author: ropensci
created: 2012-01-28 17:19:38
r rstats


pavo : tools for the analysis of color data in R
author: rmaia
created: 2012-01-31 01:13:24
r


SGPdata : The R package SGPdata contains three data sets utilized by the SGP Package as exemplars for users to set up their own data for SGP analyses.
author: CenterForAssessment
created: 2012-01-31 17:59:06
cran r sgp sgp-analyses sgp-data student-growth-percentiles student-growth-projections


mirt : Multidimensional item response theory
author: philchalmers
created: 2012-02-03 19:08:25
irt mirt r


rebird : Wrapper to the eBird API.
author: ropensci
created: 2012-02-09 21:35:39
birds ebird ebird-api ebird-webservices r r-package rstats spocc


rentrez : talk with NCBI entrez using R
author: ropensci
created: 2012-02-11 23:44:24
r r-package rstats


heroku-buildpack-r : Heroku buildpack for R - Makes deploying R on Heroku easy
author: virtualstaticvoid
created: 2012-02-15 13:52:14
heroku heroku-buildpack multiple-buildpacks r shiny shell


rdryad : R client for Dryad web services
author: ropensci
created: 2012-02-21 13:52:33
data doi dryad dryad-api oai-pmh r r-package rstats


pkgdown : Generate static html documentation for an R package
author: r-lib
created: 2012-03-15 00:36:24
documentation-tool package r


pborepo : A repository for information for Plate Boundary Observatory (PBO) stations and their data products.
author: abarbour
created: 2012-03-21 23:27:18
borehole-strainmeters laser-strainmeters pbo strain-data strainmeter r


mmand : Mathematical Morphology in Any Number of Dimensions
author: jonclayden
created: 2012-04-19 10:23:56
image-processing morphology r resampling c++


categoryCompare : Github repo of the categoryCompare meta-analysis package
author: rmflight
created: 2012-04-19 15:58:52
bioconductor r rstats


forecast : forecast package for R
author: robjhyndman
created: 2012-04-22 23:19:09
cran forecast forecasting r


agridat : Agricultural datasets
author: kwstat
created: 2012-05-25 14:00:39
data rstats r


pander : An R Pandoc Writer
author: Rapporter
created: 2012-05-25 22:35:05
literate-programming markdown pandoc pandoc-markdown r reproducible-research rmarkdown


pacman : A package management tools for R
author: trinker
created: 2012-05-29 18:09:56
cran github package-management packages r r-package


qdap : Quantitative Discourse Analysis Package: Bridging the gap between qualitative data and quantitative analysis
author: trinker
created: 2012-06-01 03:47:59
qdap quantitative-discourse-analysis text-analysis text-mining text-plotting r


rfigshare : Programmatic interface for Figshare
author: ropensci
created: 2012-06-13 15:34:22
r r-package rstats


shiny : Easy interactive web applications with R
author: rstudio
created: 2012-06-20 18:45:11
r reactive rstudio shiny web-app web-development


phonR : tools for phoneticians and phonologists
author: drammock
created: 2012-07-11 05:41:05
phonetics plotting vowels r


dynsurv : Dynamic models for survival data
author: wenjie2wang
created: 2012-07-19 03:06:14
bayesian cox-model interval-censored r survival-analysis c++


oa : Orthogonal Arrays based on Owen from Statlib
author: bertcarnell
created: 2012-07-25 21:48:06
c-plus-plus orthogonal-arrays r rcpp c++


burnr : 🔥 Forest fire history analysis in R.
author: ltrr-arizona-edu
created: 2012-08-03 22:12:47
dendrochronology ecology forestfire plot r scientific statistics


microbiome : microbiome R package
author: microbiome
created: 2012-08-07 11:38:02
hitchip hitchip-atlas human-microbiome microbiology microbiome microbiome-analysis phyloseq population-study r


rappdirs : A port of AppDirs for R
author: r-lib
created: 2012-08-10 14:06:28
appdir r


umx : Making Structural Equation Modeling (SEM) in R quick, easy, & powerful
author: tbates
created: 2012-08-14 20:18:01
behavior-genetics cran psychology r sem statistics structural-equation-modeling twin-models umx


quanteda : An R package for the Quantitative Analysis of Textual Data
author: quanteda
created: 2012-08-15 10:15:43
corpus natural-language-processing quanteda r text-analytics


ggthemes : Additional themes, scales, and geoms for ggplot2
author: jrnold
created: 2012-09-07 00:00:07
data-visualisation ggplot2 plot plotting theme visualization r


RforProteomics : Using R and Bioconductor packages for the analysis and comprehension of proteomics data.
author: lgatto
created: 2012-09-10 12:50:35
bioconductor bioconductor-packages mass-spectrometry proteomics proteomics-data r tutorial


readBrukerFlexData : Reads data files acquired by MALDI-TOF MS on Bruker Daltonics machines of the *flex series
author: sgibb
created: 2012-09-10 16:43:00
bruker-daltonics import maldi-tof-ms r


ANTsR : Advanced Normalization Tools in R
author: ANTsX
created: 2012-09-12 16:28:03
brain decomposition mri prediction r registration segmentation statistical-learning


mizer : Multi-species size-based ecological modelling in R
author: sizespectrum
created: 2012-09-21 08:51:19
ecological-models ecosystem fisheries fishing r


RSelenium : An R client for Selenium Remote WebDriver
author: ropensci
created: 2012-09-25 18:17:25
r r-package rselenium rstats selenium webdriver


kitagawa : Theoretical spectral response of a water well to harmonic strains
author: abarbour
created: 2012-09-26 05:34:43
cran harmonic-strains r seismic-waves seismometer strain strainmeter water-level water-well


rAltmetric : Query and visualize metrics from altmetric.com
author: ropensci
created: 2012-09-28 00:16:41
altmetrics bibliometrics citations r r-package rstats


SGPstateData : State/Nation specific meta data used within SGP analyses and the SGP package with the object SGPstateData
author: CenterForAssessment
created: 2012-09-29 23:39:28
assessment r sgp sgp-analyses state-assessment student-growth-percentiles student-growth-projections


SafeCareSpatial : Spatial Analysis of SafeCare project
author: OuhscBbmc
created: 2012-10-05 15:22:09
bbmc-collaborator child-abuse child-neglect dhs r safecare


pRoloc : A unifying bioinformatics framework for organelle proteomics
author: lgatto
created: 2012-10-05 18:24:28
bioconductor proteomics proteomics-data r spatial-proteomics visualisation


MALDIquant : Quantitative Analysis of Mass Spectrometry Data
author: sgibb
created: 2012-10-07 19:48:42
maldi mass-spectrometry r


Colorado : SGP analysis source code & documentation
author: CenterForAssessment
created: 2012-10-12 16:12:24
colorado r sgp sgp-analyses sgp-analysis-source student-growth-percentiles student-growth-projections


dplyr : dplyr: A grammar of data manipulation
author: tidyverse
created: 2012-10-28 13:39:17
data-manipulation grammar r


spduration : Split-population duration model in R
author: andybega
created: 2012-10-31 19:15:33
mixture-model r regression split-population survival-analysis


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